STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF2C1q and TNF related 2. (328 aa)    
Predicted Functional Partners:
COL8A2
Collagen type VIII alpha 2 chain.
  
 
 
0.617
COL2A1
Collagen type II alpha 1 chain.
   
 0.579
USH2A
Usherin.
   
 0.578
TMC1
Transmembrane channel like 1.
    
 0.554
ENSNVIP00000004732
annotation not available
      
 0.544
ENSNVIP00000027265
annotation not available
      
 0.544
CDH23
Cadherin related 23.
     
 0.539
PCDH15
Protocadherin related 15.
     
 0.539
KCNQ4
Potassium voltage-gated channel subfamily Q member 4.
      
 0.538
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.536
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.