STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000006795X-ray repair cross complementing 5. (733 aa)    
Predicted Functional Partners:
XRCC6
X-ray repair cross complementing 6.
  
 0.999
WRN
WRN RecQ like helicase.
    
 
 0.995
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
   
 0.992
LIG4
DNA ligase 4.
   
 0.991
DCLRE1C
DNA cross-link repair 1C.
    
 0.983
MRE11
MRE11 homolog, double strand break repair nuclease.
   
 0.981
LIG1
DNA ligase 1.
   
 0.928
LIG3
DNA ligase 3.
   
 0.906
ENSNVIP00000029461
Non-homologous end joining factor 1.
    
 0.902
ENSNVIP00000029483
Solute carrier family 23 member 3.
    
 0.902
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.