STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP40Ubiquitin specific peptidase 40. (1223 aa)    
Predicted Functional Partners:
ENSNVIP00000008604
annotation not available
   
 0.886
TP53
Tumor protein p53.
    
 0.870
RPS27A
Ribosomal protein S27a.
   
 0.839
DAXX
Death domain associated protein.
    
 0.839
ENSNVIP00000022379
annotation not available
   
 0.839
ENSNVIP00000003240
annotation not available
   
 0.831
GMPS
Guanine monophosphate synthase.
   
 
 0.831
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.831
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.798
DNMT1
DNA methyltransferase 1.
   
 
 0.791
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.