Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM15PR/SET domain 15. (1138 aa)    
Predicted Functional Partners:
RPL3
Ribosomal protein L3.
    
 
 0.656
PARP12
poly(ADP-ribose) polymerase family member 12.
    
   0.648
ENSNVIP00000027122
annotation not available
    
   0.617
ENSNVIP00000027131
annotation not available
    
   0.617
NUTM1
NUT midline carcinoma family member 1.
   
 0.616
ENSNVIP00000022390
Intraflagellar transport 81.
      
 0.573
COL19A1
Collagen type XIX alpha 1 chain.
    
 0.566
ENSNVIP00000016989
Tumor protein p53 inducible protein 11.
      
 0.564
RRBP1
Ribosome binding protein 1.
    
 0.550
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.549
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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