Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKX2-8NK2 homeobox 8. (238 aa)    
Predicted Functional Partners:
NKX2-2
NK2 homeobox 2.
   
  
 0.726
PAX9
Paired box 9.
      
 0.615
ENSNVIP00000004335
SET and MYND domain containing 3.
    
 
 0.574
OTX1
Orthodenticle homeobox 1.
   
  
 0.492
TMEM132C
Transmembrane protein 132C.
      
 0.452
ENSNVIP00000000039
annotation not available
      
 0.432
ENSNVIP00000009546
annotation not available
      
 0.432
PAX1
Paired box 1.
      
 0.406
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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