Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC18Leucine rich repeat containing 18. (261 aa)    
Predicted Functional Partners:
COPS3
COP9 signalosome subunit 3.
    
 0.535
PRELP
Proline and arginine rich end leucine rich repeat protein.
  
     0.509
ENSNVIP00000010166
Leucine rich alpha-2-glycoprotein 1.
  
     0.500
ENSNVIP00000031095
Lumican.
  
     0.498
ENSNVIP00000031098
Keratocan.
  
     0.498
LMF1
Lipase maturation factor 1.
    
 0.496
ENSNVIP00000025226
annotation not available
  
     0.495
POLR2E
RNA polymerase II subunit E.
    
 
 0.489
ENSNVIP00000032261
Developmentally regulated GTP binding protein 2.
      
 0.489
MYADML2
Myeloid associated differentiation marker like 2.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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