ENSNVIP00000006885 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSNVIP00000006885

annotation not available (334 aa)

Predicted Functional Partners:

H1-10

0.682

ACTL6A

0.647

H1-6

0.637

RPL3

0.617

NOC2L

0.585

LARP7

0.571

ENSNVIP00000003636

0.511

ENSNVIP00000005121

0.511

ENSNVIP00000005616

0.511

H2AZ2

0.511

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	ENSNVIP00000003636	ENSNVIP00000022661	ENSNVIP00000003636	Actin like 6A.	annotation not available	0.744
ACTL6A	ENSNVIP00000005121	ENSNVIP00000022661	ENSNVIP00000005121	Actin like 6A.	annotation not available	0.744
ACTL6A	ENSNVIP00000005616	ENSNVIP00000022661	ENSNVIP00000005616	Actin like 6A.	annotation not available	0.744
ACTL6A	ENSNVIP00000006885	ENSNVIP00000022661	ENSNVIP00000006885	Actin like 6A.	annotation not available	0.647
ACTL6A	H2AZ2	ENSNVIP00000022661	ENSNVIP00000009370	Actin like 6A.	H2A.Z variant histone 2.	0.744
ENSNVIP00000003636	ACTL6A	ENSNVIP00000003636	ENSNVIP00000022661	annotation not available	Actin like 6A.	0.744
ENSNVIP00000003636	ENSNVIP00000006885	ENSNVIP00000003636	ENSNVIP00000006885	annotation not available	annotation not available	0.511
ENSNVIP00000005121	ACTL6A	ENSNVIP00000005121	ENSNVIP00000022661	annotation not available	Actin like 6A.	0.744
ENSNVIP00000005121	ENSNVIP00000006885	ENSNVIP00000005121	ENSNVIP00000006885	annotation not available	annotation not available	0.511
ENSNVIP00000005616	ACTL6A	ENSNVIP00000005616	ENSNVIP00000022661	annotation not available	Actin like 6A.	0.744
ENSNVIP00000005616	ENSNVIP00000006885	ENSNVIP00000005616	ENSNVIP00000006885	annotation not available	annotation not available	0.511
ENSNVIP00000006885	ACTL6A	ENSNVIP00000006885	ENSNVIP00000022661	annotation not available	Actin like 6A.	0.647
ENSNVIP00000006885	ENSNVIP00000003636	ENSNVIP00000006885	ENSNVIP00000003636	annotation not available	annotation not available	0.511
ENSNVIP00000006885	ENSNVIP00000005121	ENSNVIP00000006885	ENSNVIP00000005121	annotation not available	annotation not available	0.511
ENSNVIP00000006885	ENSNVIP00000005616	ENSNVIP00000006885	ENSNVIP00000005616	annotation not available	annotation not available	0.511
ENSNVIP00000006885	H1-10	ENSNVIP00000006885	ENSNVIP00000023659	annotation not available	H1.10 linker histone.	0.682
ENSNVIP00000006885	H1-6	ENSNVIP00000006885	ENSNVIP00000007721	annotation not available	H1.6 linker histone, cluster member.	0.637
ENSNVIP00000006885	H2AZ2	ENSNVIP00000006885	ENSNVIP00000009370	annotation not available	H2A.Z variant histone 2.	0.511
ENSNVIP00000006885	LARP7	ENSNVIP00000006885	ENSNVIP00000017999	annotation not available	La ribonucleoprotein 7, transcriptional regulator.	0.571
ENSNVIP00000006885	NOC2L	ENSNVIP00000006885	ENSNVIP00000005718	annotation not available	NOC2 like nucleolar associated transcriptional repressor.	0.585