STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSPT2G1 to S phase transition 2. (608 aa)    
Predicted Functional Partners:
ENSNVIP00000014975
annotation not available
   
 0.948
ETF1
Eukaryotic translation termination factor 1.
   
 0.948
UPF1
UPF1 RNA helicase and ATPase.
    
 0.905
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
 
 0.899
GSPT1
G1 to S phase transition 1.
     
  0.882
PAPSS1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
 
  
   0.853
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
 
  
   0.847
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
  0.844
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.802
RBM12B
RNA binding motif protein 12B.
    
 
 0.790
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.