Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OLFM4Olfactomedin 4. (498 aa)    
Predicted Functional Partners:
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 
 0.754
CHGA
Chromogranin A.
      
 0.743
ENSNVIP00000003773
annotation not available
      
 0.742
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
    
 
 0.717
SMOC2
SPARC related modular calcium binding 2.
      
 0.680
AXIN2
Axin 2.
      
 0.637
TFF3
Trefoil factor 3.
      
 0.607
NOG
Noggin.
      
 0.604
MMP8
Matrix metallopeptidase 8.
   
 
 0.596
PCDH17
Protocadherin 17.
      
 0.575
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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