Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMD1Adenosylmethionine decarboxylase 1. (334 aa)    
Predicted Functional Partners:
SMS
Spermine synthase.
  
 
 0.961
SRM
Spermidine synthase.
  
 
 0.961
MAT1A
Methionine adenosyltransferase 1A.
   
 
 0.930
ENSNVIP00000015541
annotation not available
     
 0.928
MAT2A
Methionine adenosyltransferase 2A.
   
 
 0.927
MAT2B
Methionine adenosyltransferase 2B.
     
 0.904
DNMT1
DNA methyltransferase 1.
     
 0.886
ENSNVIP00000015412
annotation not available
     
  0.882
DNMT3B
DNA methyltransferase 3 beta.
     
  0.882
DNMT3A
DNA methyltransferase 3 alpha.
     
  0.823
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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