Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCTP1Multiple C2 and transmembrane domain containing 1. (998 aa)    
Predicted Functional Partners:
PRR32
Proline rich 32.
      
 0.738
KIAA0100
KIAA0100.
      
 0.723
ITSN2
Intersectin 2.
     
 0.646
EFCAB11
EF-hand calcium binding domain 11.
      
 0.568
IQCK
IQ motif containing K.
      
 0.568
PRSS45P
Serine protease 45, pseudogene.
      
 0.554
LMBR1
Limb development membrane protein 1.
      
 0.548
FAM172A
Family with sequence similarity 172 member A.
      
 0.547
TMEM44
Transmembrane protein 44.
      
 0.544
ZCCHC2
Zinc finger CCHC-type containing 2.
      
 0.537
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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