Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL13AADP ribosylation factor like GTPase 13A. (346 aa)    
Predicted Functional Partners:
PDE6D
Phosphodiesterase 6D.
   
 0.855
TBCB
Tubulin folding cofactor B.
   
 
 0.823
TBCD
Tubulin folding cofactor D.
    
 0.816
ENSNVIP00000009083
annotation not available
    
 
 0.805
ENSNVIP00000019918
annotation not available
   
 0.752
ENSNVIP00000031640
annotation not available
   
 0.752
UNC119
Unc-119 lipid binding chaperone.
    
 
 0.719
ARL10
ADP ribosylation factor like GTPase 10.
    
 0.680
ENSNVIP00000015657
Tubulin folding cofactor C.
    
 
 0.632
ENSNVIP00000021685
RP2 activator of ARL3 GTPase.
    
 
 0.632
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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