Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM58Tripartite motif containing 58. (487 aa)    
Predicted Functional Partners:
SQSTM1
Sequestosome 1.
    
 0.920
DDX41
DEAD-box helicase 41.
    
 0.882
RO60
Ro60, Y RNA binding protein.
   
 0.880
ISG15
ISG15 ubiquitin like modifier.
   
 0.830
ENSNVIP00000008604
annotation not available
    
 0.776
IRF3
Interferon regulatory factor 3.
   
 0.743
ENSNVIP00000007282
annotation not available
   
 0.725
ENSNVIP00000002171
annotation not available
    
 0.718
ENSNVIP00000028493
annotation not available
    
 0.718
ENSNVIP00000031067
annotation not available
    
 0.718
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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