Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDH17Protocadherin 17. (1163 aa)    
Predicted Functional Partners:
PCDH12
Protocadherin 12.
   
 
 0.839
ENSNVIP00000017224
Potassium voltage-gated channel modifier subfamily S member 3.
   
  
 0.755
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3.
      
 0.582
OLFM4
Olfactomedin 4.
      
 0.575
GRM2
Glutamate metabotropic receptor 2.
      
 0.544
LRRTM1
Leucine rich repeat transmembrane neuronal 1.
     
 0.543
COQ6
Coenzyme Q6, monooxygenase.
      
 0.525
C4orf33
Chromosome 4 open reading frame 33.
      
 0.464
TMCC3
Transmembrane and coiled-coil domain family 3.
      
 0.417
KCTD1
Potassium channel tetramerization domain containing 1.
      
 0.417
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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