ENSNVIP00000007065 protein (Neovison vison) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSNVIP00000007065

annotation not available (341 aa)

Predicted Functional Partners:

BBS4

0.998

BBS9

0.998

TTC8

0.998

BBS7

0.998

ENSNVIP00000021104

0.998

ENSNVIP00000018252

0.997

ENSNVIP00000027601

0.989

ENSNVIP00000009900

0.971

BBS12

0.832

ENSNVIP00000003840

0.798

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS12	BBS4	ENSNVIP00000018264	ENSNVIP00000004896	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 4.	0.757
BBS12	BBS7	ENSNVIP00000018264	ENSNVIP00000016968	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 7.	0.969
BBS12	BBS9	ENSNVIP00000018264	ENSNVIP00000013197	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 9.	0.821
BBS12	ENSNVIP00000003840	ENSNVIP00000018264	ENSNVIP00000003840	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 10.	0.983
BBS12	ENSNVIP00000007065	ENSNVIP00000018264	ENSNVIP00000007065	Bardet-Biedl syndrome 12.	annotation not available	0.832
BBS12	ENSNVIP00000009900	ENSNVIP00000018264	ENSNVIP00000009900	Bardet-Biedl syndrome 12.	annotation not available	0.507
BBS12	ENSNVIP00000018252	ENSNVIP00000018264	ENSNVIP00000018252	Bardet-Biedl syndrome 12.	annotation not available	0.806
BBS12	ENSNVIP00000021104	ENSNVIP00000018264	ENSNVIP00000021104	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 2.	0.833
BBS12	ENSNVIP00000027601	ENSNVIP00000018264	ENSNVIP00000027601	Bardet-Biedl syndrome 12.	Leucine zipper transcription factor like 1.	0.605
BBS12	TTC8	ENSNVIP00000018264	ENSNVIP00000015210	Bardet-Biedl syndrome 12.	Tetratricopeptide repeat domain 8.	0.710
BBS4	BBS12	ENSNVIP00000004896	ENSNVIP00000018264	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 12.	0.757
BBS4	BBS7	ENSNVIP00000004896	ENSNVIP00000016968	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 7.	0.998
BBS4	BBS9	ENSNVIP00000004896	ENSNVIP00000013197	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 9.	0.997
BBS4	ENSNVIP00000003840	ENSNVIP00000004896	ENSNVIP00000003840	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 10.	0.759
BBS4	ENSNVIP00000007065	ENSNVIP00000004896	ENSNVIP00000007065	Bardet-Biedl syndrome 4.	annotation not available	0.998
BBS4	ENSNVIP00000009900	ENSNVIP00000004896	ENSNVIP00000009900	Bardet-Biedl syndrome 4.	annotation not available	0.981
BBS4	ENSNVIP00000018252	ENSNVIP00000004896	ENSNVIP00000018252	Bardet-Biedl syndrome 4.	annotation not available	0.996
BBS4	ENSNVIP00000021104	ENSNVIP00000004896	ENSNVIP00000021104	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 2.	0.997
BBS4	ENSNVIP00000027601	ENSNVIP00000004896	ENSNVIP00000027601	Bardet-Biedl syndrome 4.	Leucine zipper transcription factor like 1.	0.980
BBS4	TTC8	ENSNVIP00000004896	ENSNVIP00000015210	Bardet-Biedl syndrome 4.	Tetratricopeptide repeat domain 8.	0.988