LARP4 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LARP4

La ribonucleoprotein 4. (724 aa)

Predicted Functional Partners:

FLNA

0.829

ENSNVIP00000008993

0.730

ENSNVIP00000009472

0.730

ENSNVIP00000014066

0.730

ENSNVIP00000020707

0.730

LARP4B

0.725

ATXN2

0.696

ENSNVIP00000004112

0.674

G3BP1

0.674

HECTD1

0.655

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATXN2	ENSNVIP00000004112	ENSNVIP00000021236	ENSNVIP00000004112	Ataxin 2.	annotation not available	0.918
ATXN2	G3BP1	ENSNVIP00000021236	ENSNVIP00000026331	Ataxin 2.	G3BP stress granule assembly factor 1.	0.947
ATXN2	LARP4	ENSNVIP00000021236	ENSNVIP00000007090	Ataxin 2.	La ribonucleoprotein 4.	0.696
ATXN2	LARP4B	ENSNVIP00000021236	ENSNVIP00000013104	Ataxin 2.	La ribonucleoprotein 4B.	0.486
ENSNVIP00000004112	ATXN2	ENSNVIP00000004112	ENSNVIP00000021236	annotation not available	Ataxin 2.	0.918
ENSNVIP00000004112	ENSNVIP00000008993	ENSNVIP00000004112	ENSNVIP00000008993	annotation not available	annotation not available	0.481
ENSNVIP00000004112	ENSNVIP00000009472	ENSNVIP00000004112	ENSNVIP00000009472	annotation not available	annotation not available	0.481
ENSNVIP00000004112	ENSNVIP00000014066	ENSNVIP00000004112	ENSNVIP00000014066	annotation not available	annotation not available	0.481
ENSNVIP00000004112	ENSNVIP00000020707	ENSNVIP00000004112	ENSNVIP00000020707	annotation not available	annotation not available	0.481
ENSNVIP00000004112	LARP4	ENSNVIP00000004112	ENSNVIP00000007090	annotation not available	La ribonucleoprotein 4.	0.674
ENSNVIP00000008993	ENSNVIP00000004112	ENSNVIP00000008993	ENSNVIP00000004112	annotation not available	annotation not available	0.481
ENSNVIP00000008993	G3BP1	ENSNVIP00000008993	ENSNVIP00000026331	annotation not available	G3BP stress granule assembly factor 1.	0.481
ENSNVIP00000008993	HECTD1	ENSNVIP00000008993	ENSNVIP00000004336	annotation not available	HECT domain E3 ubiquitin protein ligase 1.	0.445
ENSNVIP00000008993	LARP4	ENSNVIP00000008993	ENSNVIP00000007090	annotation not available	La ribonucleoprotein 4.	0.730
ENSNVIP00000008993	LARP4B	ENSNVIP00000008993	ENSNVIP00000013104	annotation not available	La ribonucleoprotein 4B.	0.828
ENSNVIP00000009472	ENSNVIP00000004112	ENSNVIP00000009472	ENSNVIP00000004112	annotation not available	annotation not available	0.481
ENSNVIP00000009472	G3BP1	ENSNVIP00000009472	ENSNVIP00000026331	annotation not available	G3BP stress granule assembly factor 1.	0.481
ENSNVIP00000009472	HECTD1	ENSNVIP00000009472	ENSNVIP00000004336	annotation not available	HECT domain E3 ubiquitin protein ligase 1.	0.445
ENSNVIP00000009472	LARP4	ENSNVIP00000009472	ENSNVIP00000007090	annotation not available	La ribonucleoprotein 4.	0.730
ENSNVIP00000009472	LARP4B	ENSNVIP00000009472	ENSNVIP00000013104	annotation not available	La ribonucleoprotein 4B.	0.828