STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC46Leucine rich repeat containing 46. (322 aa)    
Predicted Functional Partners:
PACS2
Phosphofurin acidic cluster sorting protein 2.
    
   0.869
ENSNVIP00000000606
annotation not available
   
   0.852
POLE
DNA polymerase epsilon, catalytic subunit.
    
   0.829
ENSNVIP00000018255
annotation not available
   
 0.803
ENSNVIP00000019234
annotation not available
   
 
 0.674
CFAP161
Cilia and flagella associated protein 161.
    
 0.664
NIPSNAP1
Nipsnap homolog 1.
   
  
 0.658
NME8
NME/NM23 family member 8.
    
 0.646
TFPT
TCF3 fusion partner.
    
 0.639
ZMYND10
Zinc finger MYND-type containing 10.
   
 
 0.637
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.