STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP8A1ATPase phospholipid transporting 8A1. (1164 aa)    
Predicted Functional Partners:
TMEM30B
Transmembrane protein 30B.
    
 0.981
ENSNVIP00000028873
Transmembrane protein 30A.
    
 0.964
ENSNVIP00000021817
annotation not available
    
 0.946
CASP3
Caspase 3.
     
  0.882
ATP11B
ATPase phospholipid transporting 11B (putative).
  
 
0.785
ATP11C
ATPase phospholipid transporting 11C.
    
 0.780
ATP11A
ATPase phospholipid transporting 11A.
  
 
0.749
ENSNVIP00000030927
Protein phosphatase 1 regulatory subunit 8.
     
 0.582
PPP1R37
Protein phosphatase 1 regulatory subunit 37.
      
 0.568
ATP8B1
ATPase phospholipid transporting 8B1.
  
 
0.568
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.