STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSDE1Cold shock domain containing E1. (845 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.876
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.831
ITSN1
Intersectin 1.
    
 0.808
UBAP2L
Ubiquitin associated protein 2 like.
   
 0.776
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.758
ENSNVIP00000013070
annotation not available
    
 0.749
PIK3CA
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha.
   
 0.746
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.742
LARP6
La ribonucleoprotein 6, translational regulator.
      
 0.738
ZFYVE21
Zinc finger FYVE-type containing 21.
      
 0.738
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.