Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF13PHD finger protein 13. (291 aa)    
Predicted Functional Partners:
TBX20
T-box transcription factor 20.
    
   0.937
MCRS1
Microspherule protein 1.
   
 0.864
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.852
ENSNVIP00000018003
Biliverdin reductase A.
    
   0.826
DNASE1L2
Deoxyribonuclease 1 like 2.
    
   0.823
DNASE1
Deoxyribonuclease 1.
    
   0.823
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.815
ENSNVIP00000024175
Testis expressed 30.
    
 0.815
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.768
ARID4A
AT-rich interaction domain 4A.
   
 
 0.698
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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