NMI protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NMI

N-myc and STAT interactor. (315 aa)

Predicted Functional Partners:

IFI35

0.989

ENSNVIP00000018558

0.887

RPL27

0.744

ENSNVIP00000007282

0.716

ASRGL1

0.649

MYC

0.634

ENSNVIP00000002518

0.629

ENSNVIP00000006291

0.629

UBE2L6

0.613

TNPO3

0.611

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASRGL1	NMI	ENSNVIP00000027451	ENSNVIP00000007175	Asparaginase and isoaspartyl peptidase 1.	N-myc and STAT interactor.	0.649
ENSNVIP00000002518	ENSNVIP00000006291	ENSNVIP00000002518	ENSNVIP00000006291	annotation not available	annotation not available	0.544
ENSNVIP00000002518	NMI	ENSNVIP00000002518	ENSNVIP00000007175	annotation not available	N-myc and STAT interactor.	0.629
ENSNVIP00000006291	ENSNVIP00000002518	ENSNVIP00000006291	ENSNVIP00000002518	annotation not available	annotation not available	0.544
ENSNVIP00000006291	NMI	ENSNVIP00000006291	ENSNVIP00000007175	annotation not available	N-myc and STAT interactor.	0.629
ENSNVIP00000007282	IFI35	ENSNVIP00000007282	ENSNVIP00000017608	annotation not available	Interferon induced protein 35.	0.875
ENSNVIP00000007282	NMI	ENSNVIP00000007282	ENSNVIP00000007175	annotation not available	N-myc and STAT interactor.	0.716
ENSNVIP00000007282	UBE2L6	ENSNVIP00000007282	ENSNVIP00000020605	annotation not available	Ubiquitin conjugating enzyme E2 L6.	0.469
ENSNVIP00000018558	NMI	ENSNVIP00000018558	ENSNVIP00000007175	BRMS1 transcriptional repressor and anoikis regulator.	N-myc and STAT interactor.	0.887
IFI35	ENSNVIP00000007282	ENSNVIP00000017608	ENSNVIP00000007282	Interferon induced protein 35.	annotation not available	0.875
IFI35	NMI	ENSNVIP00000017608	ENSNVIP00000007175	Interferon induced protein 35.	N-myc and STAT interactor.	0.989
IFI35	UBE2L6	ENSNVIP00000017608	ENSNVIP00000020605	Interferon induced protein 35.	Ubiquitin conjugating enzyme E2 L6.	0.902
MYC	NMI	ENSNVIP00000011159	ENSNVIP00000007175	MYC proto-oncogene, bHLH transcription factor.	N-myc and STAT interactor.	0.634
NMI	ASRGL1	ENSNVIP00000007175	ENSNVIP00000027451	N-myc and STAT interactor.	Asparaginase and isoaspartyl peptidase 1.	0.649
NMI	ENSNVIP00000002518	ENSNVIP00000007175	ENSNVIP00000002518	N-myc and STAT interactor.	annotation not available	0.629
NMI	ENSNVIP00000006291	ENSNVIP00000007175	ENSNVIP00000006291	N-myc and STAT interactor.	annotation not available	0.629
NMI	ENSNVIP00000007282	ENSNVIP00000007175	ENSNVIP00000007282	N-myc and STAT interactor.	annotation not available	0.716
NMI	ENSNVIP00000018558	ENSNVIP00000007175	ENSNVIP00000018558	N-myc and STAT interactor.	BRMS1 transcriptional repressor and anoikis regulator.	0.887
NMI	IFI35	ENSNVIP00000007175	ENSNVIP00000017608	N-myc and STAT interactor.	Interferon induced protein 35.	0.989
NMI	MYC	ENSNVIP00000007175	ENSNVIP00000011159	N-myc and STAT interactor.	MYC proto-oncogene, bHLH transcription factor.	0.634