STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD1FAST kinase domains 1. (770 aa)    
Predicted Functional Partners:
FASTKD3
FAST kinase domains 3.
   
 
 0.860
PEPD
Peptidase D.
   
 
 0.596
FASTKD2
FAST kinase domains 2.
      
 0.595
LRPPRC
Leucine rich pentatricopeptide repeat containing.
      
 0.588
PTCD3
Pentatricopeptide repeat domain 3.
  
   
 0.578
FAT2
FAT atypical cadherin 2.
      
 0.548
ENSNVIP00000025261
Lysine demethylase 1B.
      
 0.543
CYHR1
Cysteine and histidine rich 1.
      
 0.539
CDC27
Cell division cycle 27.
   
  
 0.506
TRUB2
TruB pseudouridine synthase family member 2.
      
 0.496
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.