STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFF2Trefoil factor 2. (129 aa)    
Predicted Functional Partners:
CBLIF
Cobalamin binding intrinsic factor.
   
  
 0.734
ENSNVIP00000008269
annotation not available
   
  
 0.722
REG4
Regenerating family member 4.
   
  
 0.589
ENSNVIP00000014304
Colipase.
   
  
 0.574
ZG16
Zymogen granule protein 16.
   
  
 0.506
GKN2
Gastrokine 2.
   
  
 0.499
PIGR
Polymeric immunoglobulin receptor.
   
  
 0.497
AGMO
Alkylglycerol monooxygenase.
      
 0.488
GATA5
GATA binding protein 5.
      
 0.488
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.482
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.