Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GABRA1Gamma-aminobutyric acid type A receptor alpha1 subunit. (471 aa)    
Predicted Functional Partners:
ENSNVIP00000021521
Gamma-aminobutyric acid type A receptor beta3 subunit.
  
0.986
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
  
0.969
GABRB1
Gamma-aminobutyric acid type A receptor beta1 subunit.
  
0.969
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
  
 
0.958
GPHN
Gephyrin.
    
 0.948
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
  
0.943
TRAK2
Trafficking kinesin protein 2.
     
 0.914
GABRG1
Gamma-aminobutyric acid type A receptor gamma1 subunit.
   
 0.912
GABRG3
Gamma-aminobutyric acid type A receptor gamma3 subunit.
   
 0.912
PLCL1
Phospholipase C like 1 (inactive).
     
 0.891
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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