Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIMA1LIM domain and actin binding 1. (764 aa)    
Predicted Functional Partners:
ANLN
Anillin actin binding protein.
    
 
 0.737
ALG6
ALG6 alpha-1,3-glucosyltransferase.
      
 0.727
VPS26A
VPS26, retromer complex component A.
      
 0.701
LRRN2
Leucine rich repeat neuronal 2.
      
 0.673
ENSNVIP00000005907
annotation not available
   
 0.627
XIRP2
Xin actin binding repeat containing 2.
   
  0.622
ENSNVIP00000010236
annotation not available
      
 0.605
GDI2
GDP dissociation inhibitor 2.
      
 0.594
DDX51
DEAD-box helicase 51.
      
 0.561
TMLHE
Trimethyllysine hydroxylase, epsilon.
    
 
 0.495
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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