Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000007273Sorting nexin 25. (840 aa)    
Predicted Functional Partners:
CCDC177
Coiled-coil domain containing 177.
      
 0.716
VAPB
VAMP associated protein B and C.
    
 
 0.695
ENSNVIP00000028159
annotation not available
      
 0.650
BEND6
BEN domain containing 6.
      
 0.619
ANKRD10
Ankyrin repeat domain 10.
    
 
 0.613
SNX14
Sorting nexin 14.
   
 
 0.561
ARHGAP33
Rho GTPase activating protein 33.
      
 0.545
ENSNVIP00000000741
RAB33A, member RAS oncogene family.
      
 0.537
AFF1
AF4/FMR2 family member 1.
   
  
 0.532
PMS1
PMS1 homolog 1, mismatch repair system component.
   
  
 0.518
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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