Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDK5RAP3CDK5 regulatory subunit associated protein 3. (529 aa)    
Predicted Functional Partners:
UFL1
UFM1 specific ligase 1.
   
 
 0.986
DDRGK1
DDRGK domain containing 1.
   
 
 0.967
ENSNVIP00000002103
Ubiquitin-fold modifier conjugating enzyme 1.
   
 
 0.942
FKBP6
FKBP prolyl isomerase 6.
    
   0.937
ENSNVIP00000002231
annotation not available
    
 
 0.906
ENSNVIP00000026714
annotation not available
    
 
 0.906
LTN1
Listerin E3 ubiquitin protein ligase 1.
    
 
 0.774
CDKN2B
Cyclin dependent kinase inhibitor 2B.
    
   0.738
NEMF
Nuclear export mediator factor.
    
 
 0.668
ENSNVIP00000019827
Eukaryotic translation initiation factor 6.
    
 
 0.650
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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