Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDHR5Cadherin related family member 5. (838 aa)    
Predicted Functional Partners:
CDHR2
Cadherin related family member 2.
   
 0.998
CDH23
Cadherin related 23.
   
 0.954
USH1C
USH1 protein network component harmonin.
   
 
 0.910
CDH17
Cadherin 17.
   
 
 0.810
CDH8
Cadherin 8.
   
 0.802
CDH11
Cadherin 11.
   
0.801
CDH7
Cadherin 7.
   
 0.801
XPNPEP2
X-prolyl aminopeptidase 2.
   
    0.726
CTNNA1
Catenin alpha 1.
   
 0.722
CTNNA2
Catenin alpha 2.
   
 0.722
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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