STX8 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

STX8

Syntaxin 8. (236 aa)

Predicted Functional Partners:

ENSNVIP00000009318

0.985

ENSNVIP00000030925

0.975

ENSNVIP00000011765

0.964

ENSNVIP00000031617

0.964

VAMP4

0.962

ENSNVIP00000021445

0.960

ENSNVIP00000025352

0.960

VAMP8

0.958

ENSNVIP00000010152

0.956

STX3

0.950

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000009318	ENSNVIP00000010152	ENSNVIP00000009318	ENSNVIP00000010152	Vesicle transport through interaction with t-SNAREs 1A.	Syntaxin 18.	0.962
ENSNVIP00000009318	ENSNVIP00000011765	ENSNVIP00000009318	ENSNVIP00000011765	Vesicle transport through interaction with t-SNAREs 1A.	annotation not available	0.980
ENSNVIP00000009318	ENSNVIP00000021445	ENSNVIP00000009318	ENSNVIP00000021445	Vesicle transport through interaction with t-SNAREs 1A.	annotation not available	0.989
ENSNVIP00000009318	ENSNVIP00000025352	ENSNVIP00000009318	ENSNVIP00000025352	Vesicle transport through interaction with t-SNAREs 1A.	annotation not available	0.989
ENSNVIP00000009318	ENSNVIP00000030925	ENSNVIP00000009318	ENSNVIP00000030925	Vesicle transport through interaction with t-SNAREs 1A.	Syntaxin 12.	0.994
ENSNVIP00000009318	ENSNVIP00000031617	ENSNVIP00000009318	ENSNVIP00000031617	Vesicle transport through interaction with t-SNAREs 1A.	annotation not available	0.980
ENSNVIP00000009318	STX3	ENSNVIP00000009318	ENSNVIP00000000130	Vesicle transport through interaction with t-SNAREs 1A.	Syntaxin 3.	0.759
ENSNVIP00000009318	STX8	ENSNVIP00000009318	ENSNVIP00000007325	Vesicle transport through interaction with t-SNAREs 1A.	Syntaxin 8.	0.985
ENSNVIP00000009318	VAMP4	ENSNVIP00000009318	ENSNVIP00000032388	Vesicle transport through interaction with t-SNAREs 1A.	Vesicle associated membrane protein 4.	0.999
ENSNVIP00000009318	VAMP8	ENSNVIP00000009318	ENSNVIP00000023992	Vesicle transport through interaction with t-SNAREs 1A.	Vesicle associated membrane protein 8.	0.959
ENSNVIP00000010152	ENSNVIP00000009318	ENSNVIP00000010152	ENSNVIP00000009318	Syntaxin 18.	Vesicle transport through interaction with t-SNAREs 1A.	0.962
ENSNVIP00000010152	ENSNVIP00000011765	ENSNVIP00000010152	ENSNVIP00000011765	Syntaxin 18.	annotation not available	0.907
ENSNVIP00000010152	ENSNVIP00000021445	ENSNVIP00000010152	ENSNVIP00000021445	Syntaxin 18.	annotation not available	0.961
ENSNVIP00000010152	ENSNVIP00000025352	ENSNVIP00000010152	ENSNVIP00000025352	Syntaxin 18.	annotation not available	0.961
ENSNVIP00000010152	ENSNVIP00000030925	ENSNVIP00000010152	ENSNVIP00000030925	Syntaxin 18.	Syntaxin 12.	0.961
ENSNVIP00000010152	ENSNVIP00000031617	ENSNVIP00000010152	ENSNVIP00000031617	Syntaxin 18.	annotation not available	0.907
ENSNVIP00000010152	STX3	ENSNVIP00000010152	ENSNVIP00000000130	Syntaxin 18.	Syntaxin 3.	0.886
ENSNVIP00000010152	STX8	ENSNVIP00000010152	ENSNVIP00000007325	Syntaxin 18.	Syntaxin 8.	0.956
ENSNVIP00000010152	VAMP4	ENSNVIP00000010152	ENSNVIP00000032388	Syntaxin 18.	Vesicle associated membrane protein 4.	0.963
ENSNVIP00000010152	VAMP8	ENSNVIP00000010152	ENSNVIP00000023992	Syntaxin 18.	Vesicle associated membrane protein 8.	0.972