TRPM1 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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Experiments

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[Homology]

Score

TRPM1

Transient receptor potential cation channel subfamily M member 1. (1663 aa)

Predicted Functional Partners:

RGS11

0.946

NYX

0.822

GNB3

0.815

GRM6

0.804

LRIT3

0.757

RHO

0.756

RGS7

0.721

ENSNVIP00000013785

0.721

MLANA

0.673

ENSNVIP00000005145

0.662

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000005145	MLANA	ENSNVIP00000005145	ENSNVIP00000016728	Tyrosinase.	melan-A.	0.924
ENSNVIP00000005145	TRPM1	ENSNVIP00000005145	ENSNVIP00000007329	Tyrosinase.	Transient receptor potential cation channel subfamily M member 1.	0.662
ENSNVIP00000013785	GNB3	ENSNVIP00000013785	ENSNVIP00000031991	annotation not available	G protein subunit beta 3.	0.625
ENSNVIP00000013785	GRM6	ENSNVIP00000013785	ENSNVIP00000012147	annotation not available	Glutamate metabotropic receptor 6.	0.495
ENSNVIP00000013785	LRIT3	ENSNVIP00000013785	ENSNVIP00000010937	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.677
ENSNVIP00000013785	NYX	ENSNVIP00000013785	ENSNVIP00000019606	annotation not available	Nyctalopin.	0.451
ENSNVIP00000013785	RGS11	ENSNVIP00000013785	ENSNVIP00000018879	annotation not available	Regulator of G protein signaling 11.	0.787
ENSNVIP00000013785	TRPM1	ENSNVIP00000013785	ENSNVIP00000007329	annotation not available	Transient receptor potential cation channel subfamily M member 1.	0.721
GNB3	ENSNVIP00000013785	ENSNVIP00000031991	ENSNVIP00000013785	G protein subunit beta 3.	annotation not available	0.625
GNB3	GRM6	ENSNVIP00000031991	ENSNVIP00000012147	G protein subunit beta 3.	Glutamate metabotropic receptor 6.	0.525
GNB3	LRIT3	ENSNVIP00000031991	ENSNVIP00000010937	G protein subunit beta 3.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.789
GNB3	NYX	ENSNVIP00000031991	ENSNVIP00000019606	G protein subunit beta 3.	Nyctalopin.	0.692
GNB3	RGS11	ENSNVIP00000031991	ENSNVIP00000018879	G protein subunit beta 3.	Regulator of G protein signaling 11.	0.849
GNB3	RGS7	ENSNVIP00000031991	ENSNVIP00000002425	G protein subunit beta 3.	Regulator of G protein signaling 7.	0.625
GNB3	RHO	ENSNVIP00000031991	ENSNVIP00000012200	G protein subunit beta 3.	Rhodopsin.	0.849
GNB3	TRPM1	ENSNVIP00000031991	ENSNVIP00000007329	G protein subunit beta 3.	Transient receptor potential cation channel subfamily M member 1.	0.815
GRM6	ENSNVIP00000013785	ENSNVIP00000012147	ENSNVIP00000013785	Glutamate metabotropic receptor 6.	annotation not available	0.495
GRM6	GNB3	ENSNVIP00000012147	ENSNVIP00000031991	Glutamate metabotropic receptor 6.	G protein subunit beta 3.	0.525
GRM6	LRIT3	ENSNVIP00000012147	ENSNVIP00000010937	Glutamate metabotropic receptor 6.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.750
GRM6	NYX	ENSNVIP00000012147	ENSNVIP00000019606	Glutamate metabotropic receptor 6.	Nyctalopin.	0.593