STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD6IPProgrammed cell death 6 interacting protein. (855 aa)    
Predicted Functional Partners:
CHMP4B
Charged multivesicular body protein 4B.
   
 0.994
ENSNVIP00000028312
Charged multivesicular body protein 4C.
   
 0.994
CHMP4A
Charged multivesicular body protein 4A.
    
 0.982
MVB12A
Multivesicular body subunit 12A.
     
 0.965
MVB12B
Multivesicular body subunit 12B.
     
 0.945
ENSNVIP00000003019
annotation not available
    
 0.898
ENSNVIP00000021161
annotation not available
    
 0.898
ENSNVIP00000025587
annotation not available
    
 0.898
ENSNVIP00000029254
annotation not available
    
 0.898
ENSNVIP00000000616
annotation not available
   
 0.893
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.