Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAMTA1Calmodulin binding transcription activator 1. (1673 aa)    
Predicted Functional Partners:
ENSNVIP00000020061
Proteasome activator subunit 3 interacting protein 1.
    
 
 0.841
ENSNVIP00000017358
Proteasome activator subunit 3.
    
   0.661
DIXDC1
DIX domain containing 1.
   
  
 0.492
ENSNVIP00000021786
SS18 like 2.
      
 0.489
CHGA
Chromogranin A.
      
 0.488
COQ4
Coenzyme Q4.
      
 0.486
RBFOX1
RNA binding fox-1 homolog 1.
   
  
 0.470
DOC2A
Double C2 domain alpha.
   
  
 0.462
RAPGEF2
Rap guanine nucleotide exchange factor 2.
      
 0.461
UBTF
Upstream binding transcription factor.
      
 0.459
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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