STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN6Tetraspanin 6. (245 aa)    
Predicted Functional Partners:
PICK1
Protein interacting with PRKCA 1.
    
 0.621
SH2D7
SH2 domain containing 7.
      
 0.558
FRMPD4
FERM and PDZ domain containing 4.
      
 0.533
DHRS13
Dehydrogenase/reductase 13.
    
 
 0.483
RAB14
RAB14, member RAS oncogene family.
    
 0.481
TECR
trans-2,3-enoyl-CoA reductase.
      
 0.479
APOLD1
Apolipoprotein L domain containing 1.
     
 0.455
STARD13
StAR related lipid transfer domain containing 13.
      
 0.444
SEZ6L2
Seizure related 6 homolog like 2.
   
  
 0.438
FLOT1
Flotillin 1.
   
  
 0.429
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.