Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC197Coiled-coil domain containing 197. (271 aa)    
Predicted Functional Partners:
ENSNVIP00000013359
TNF receptor associated factor 6.
    
 0.767
TP53
Tumor protein p53.
    
 0.718
WASHC3
WASH complex subunit 3.
    
   0.696
ENSNVIP00000002171
annotation not available
   
 0.695
ENSNVIP00000028493
annotation not available
   
 0.695
ENSNVIP00000031067
annotation not available
   
 0.695
SLC7A11
Solute carrier family 7 member 11.
    
 
 0.645
FOXM1
Forkhead box M1.
    
 
 0.638
RNF128
Ring finger protein 128.
    
 0.630
TRAF5
TNF receptor associated factor 5.
    
 0.618
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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