STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000007372Activator of basal transcription 1. (269 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing 36.
   
 
 0.984
ENSNVIP00000027970
Neuroguidin.
   
 
 0.959
ENSNVIP00000016118
Bystin like.
   
 
 0.955
NOP14
NOP14 nucleolar protein.
   
 
 0.953
DDX10
DEAD-box helicase 10.
   
 
 0.945
DDX49
DEAD-box helicase 49.
   
 
 0.937
ENSNVIP00000009026
annotation not available
   
 
 0.932
UTP25
UTP25 small subunit processor component.
   
 
 0.932
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.930
ENSNVIP00000001400
annotation not available
   
 
 0.925
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.