STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC23IPSEC23 interacting protein. (960 aa)    
Predicted Functional Partners:
ENSNVIP00000031364
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.982
SEC24A
SEC24 homolog A, COPII coat complex component.
   
 
 0.908
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 0.836
ENSNVIP00000006455
Sec23 homolog A, coat complex II component.
   
 0.835
ENSNVIP00000007536
annotation not available
   
   0.830
ENSNVIP00000029128
annotation not available
   
   0.830
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.812
SCFD1
Sec1 family domain containing 1.
   
 
 0.797
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.793
ENSNVIP00000013986
SEC23 homolog B, coat complex II component.
   
 0.764
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.