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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000007399Chromosome 4 open reading frame 47. (310 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
      
 0.908
C9orf116
Chromosome 9 open reading frame 116.
      
 0.896
ARMC3
Armadillo repeat containing 3.
   
  
 0.873
IQUB
IQ motif and ubiquitin domain containing.
      
 0.857
ENSNVIP00000009304
annotation not available
   
  
 0.779
ENSNVIP00000007962
annotation not available
    
 0.764
CCDC170
Coiled-coil domain containing 170.
    
 
 0.631
ENSNVIP00000010093
annotation not available
    
 
 0.631
DNAH11
Dynein axonemal heavy chain 11.
   
  
 0.540
CCDC40
Coiled-coil domain containing 40.
      
 0.523
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.