STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH19Protocadherin 19. (1145 aa)    
Predicted Functional Partners:
PCDH12
Protocadherin 12.
   
 
 0.638
CDKL5
Cyclin dependent kinase like 5.
      
 0.615
STXBP1
Syntaxin binding protein 1.
      
 0.607
KCNQ2
Potassium voltage-gated channel subfamily Q member 2.
      
 0.602
UNC5B
Unc-5 netrin receptor B.
    
 
 0.588
SPTAN1
Spectrin alpha, non-erythrocytic 1.
      
 0.547
ARX
Aristaless related homeobox.
     
 0.545
COQ6
Coenzyme Q6, monooxygenase.
      
 0.525
NRXN3
Neurexin 3.
      
 0.512
PNKP
Polynucleotide kinase 3'-phosphatase.
      
 0.504
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.