STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBSmall RNA binding exonuclease protection factor La. (405 aa)    
Predicted Functional Partners:
RO60
Ro60, Y RNA binding protein.
    
 
 0.926
LARP7
La ribonucleoprotein 7, transcriptional regulator.
   
 
 0.895
METAP2
Methionyl aminopeptidase 2.
   
    0.854
ZC3H15
Zinc finger CCCH-type containing 15.
   
    0.846
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.838
NOP58
NOP58 ribonucleoprotein.
   
 
 0.835
NCL
Nucleolin.
   
 
 0.830
OXER1
Oxoeicosanoid receptor 1.
    
   0.829
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
  
 0.824
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
   
    0.817
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.