STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASIC1Acid sensing ion channel subunit 1. (558 aa)    
Predicted Functional Partners:
ASIC4
Acid sensing ion channel subunit family member 4.
     
 0.731
ASIC3
Acid sensing ion channel subunit 3.
    
 0.725
ENSNVIP00000013015
Stomatin.
    
 0.596
STOML3
Stomatin like 3.
    
 0.596
STOML1
Stomatin like 1.
    
 0.595
PICK1
Protein interacting with PRKCA 1.
    
 
 0.551
PIGQ
Phosphatidylinositol glycan anchor biosynthesis class Q.
      
 0.482
ENSNVIP00000011489
LLP homolog, long-term synaptic facilitation factor.
      
 0.475
ENSNVIP00000031069
Serum/glucocorticoid regulated kinase family member 3.
    
 0.422
ACSS3
acyl-CoA synthetase short chain family member 3.
      
 0.419
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.