Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000007491Sorting nexin 11. (270 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
   
 0.871
VPS26A
VPS26, retromer complex component A.
    
 0.752
VPS26B
VPS26, retromer complex component B.
    
 0.747
WLS
Wnt ligand secretion mediator.
    
 0.727
ENSNVIP00000009707
annotation not available
   
 0.720
VPS29
VPS29 retromer complex component.
   
 0.720
SNX27
Sorting nexin 27.
    
 
 0.686
ENSNVIP00000022938
Sorting nexin 15.
     
 0.663
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
      
 0.610
RPS6KC1
Ribosomal protein S6 kinase C1.
     
 0.595
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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