Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A4Solute carrier family 38 member 4. (547 aa)    
Predicted Functional Partners:
SLC1A5
Solute carrier family 1 member 5.
   
  
 0.754
ENSNVIP00000019602
annotation not available
      
 0.754
SMOC1
SPARC related modular calcium binding 1.
      
 0.753
ENSNVIP00000029057
Solute carrier family 7 member 1.
   
  
 0.675
SLC1A7
Solute carrier family 1 member 7.
      
 0.652
STEAP3
STEAP3 metalloreductase.
   
  
 0.615
SLC1A1
Solute carrier family 1 member 1.
      
 0.615
ZNF445
Zinc finger protein 445.
    
 0.574
SCN11A
Sodium voltage-gated channel alpha subunit 11.
      
 0.557
JADE1
Jade family PHD finger 1.
      
 0.549
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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