Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RABEPKRab9 effector protein with kelch motifs. (354 aa)    
Predicted Functional Partners:
PLIN3
Perilipin 3.
    
 0.789
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
   
 0.686
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
   
 0.686
TTC8
Tetratricopeptide repeat domain 8.
      
 0.638
PLIN1
Perilipin 1.
    
  0.638
PUM2
Pumilio RNA binding family member 2.
   
   0.637
ALDH6A1
Aldehyde dehydrogenase 6 family member A1.
      
 0.637
PUM1
Pumilio RNA binding family member 1.
   
   0.637
ANXA5
Annexin A5.
    
   0.629
M6PR
Mannose-6-phosphate receptor, cation dependent.
    
  0.619
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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