Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYCP1Synaptonemal complex protein 1. (958 aa)    
Predicted Functional Partners:
SYCE1
Synaptonemal complex central element protein 1.
    
 0.966
SYCE2
Synaptonemal complex central element protein 2.
    
 0.965
ENSNVIP00000007376
Synaptonemal complex central element protein 3.
    
 0.938
SYCP2
Synaptonemal complex protein 2.
   
 0.931
TEX12
Testis expressed 12.
    
 0.890
REC8
REC8 meiotic recombination protein.
    
 0.813
ENSNVIP00000021450
annotation not available
   
    0.788
ENSNVIP00000031849
annotation not available
   
    0.788
CFAP161
Cilia and flagella associated protein 161.
   
  0.774
LDB1
LIM domain binding 1.
   
   0.720
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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