Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SONSON DNA binding protein. (2407 aa)    
Predicted Functional Partners:
ANKRD11
Ankyrin repeat domain 11.
   
  0.993
RBM39
RNA binding motif protein 39.
   
  0.990
PRRC2C
Proline rich coiled-coil 2C.
   
    0.980
SF3B1
Splicing factor 3b subunit 1.
   
  0.926
RBM23
RNA binding motif protein 23.
   
 0.914
PNISR
PNN interacting serine and arginine rich protein.
   
 0.912
SPC24
SPC24 component of NDC80 kinetochore complex.
   
    0.886
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.886
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.879
ENSNVIP00000001989
annotation not available
   
 0.874
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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