Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
USP43Ubiquitin specific peptidase 43. (1018 aa)    
Predicted Functional Partners:
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
    
  0.752
ENSNVIP00000024373
Proliferating cell nuclear antigen.
   
 0.721
ENSNVIP00000008604
annotation not available
    
 0.707
USP10
Ubiquitin specific peptidase 10.
    
 0.645
ISG15
ISG15 ubiquitin like modifier.
    
 0.616
RFC4
Replication factor C subunit 4.
    
 0.602
ENSNVIP00000013359
TNF receptor associated factor 6.
    
 0.594
POLH
DNA polymerase eta.
   
 
 0.590
ENSNVIP00000028008
Replication factor C subunit 3.
    
 0.583
YWHAE
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon.
    
  0.580
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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