STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF9TNF receptor superfamily member 9. (255 aa)    
Predicted Functional Partners:
TNFSF9
TNF superfamily member 9.
    
 0.995
TRAF1
TNF receptor associated factor 1.
   
 
 0.848
TRAF2
TNF receptor associated factor 2.
   
 
 0.848
ENSNVIP00000031995
CD4 molecule.
   
  
 0.749
TRAF3
TNF receptor associated factor 3.
   
 
 0.705
TNFRSF4
TNF receptor superfamily member 4.
   
 
 0.702
ENSNVIP00000025729
TBCC domain containing 1.
      
 0.679
CD8A
CD8a molecule.
      
 0.639
CD28
CD28 molecule.
   
  
 0.637
ENSNVIP00000010042
GINS complex subunit 1.
      
 0.615
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.