STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCA1IQ motif containing with AAA domain 1. (827 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.954
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.750
LRRC10
Leucine rich repeat containing 10.
    
 
 0.742
ENSNVIP00000023202
annotation not available
   
 0.729
IST1
IST1 factor associated with ESCRT-III.
    
 0.693
ENSNVIP00000015232
YOD1 deubiquitinase.
   
 0.683
UBXN1
UBX domain protein 1.
   
 0.676
ENSNVIP00000002001
Dynein assembly factor with WD repeats 1.
   
 
 0.666
ENSNVIP00000014023
Serine/threonine kinase 17b.
   
 
 0.662
CCDC149
Coiled-coil domain containing 149.
      
 0.656
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.