PARK7 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

PARK7

Parkinsonism associated deglycase. (189 aa)

Predicted Functional Partners:

TP53

0.908

MAP3K5

0.900

SOD1

0.884

ENSNVIP00000003538

0.881

ENSNVIP00000013865

0.881

SOD3

0.880

SNCA

0.826

DAXX

0.796

NFE2L2

0.792

TPI1

0.756

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAXX	MAP3K5	ENSNVIP00000016455	ENSNVIP00000024630	Death domain associated protein.	Mitogen-activated protein kinase kinase kinase 5.	0.996
DAXX	PARK7	ENSNVIP00000016455	ENSNVIP00000007637	Death domain associated protein.	Parkinsonism associated deglycase.	0.796
DAXX	TP53	ENSNVIP00000016455	ENSNVIP00000005141	Death domain associated protein.	Tumor protein p53.	0.995
ENSNVIP00000003538	ENSNVIP00000013865	ENSNVIP00000003538	ENSNVIP00000013865	annotation not available	annotation not available	0.923
ENSNVIP00000003538	PARK7	ENSNVIP00000003538	ENSNVIP00000007637	annotation not available	Parkinsonism associated deglycase.	0.881
ENSNVIP00000003538	SNCA	ENSNVIP00000003538	ENSNVIP00000000095	annotation not available	Synuclein alpha.	0.983
ENSNVIP00000003538	TP53	ENSNVIP00000003538	ENSNVIP00000005141	annotation not available	Tumor protein p53.	0.503
ENSNVIP00000013865	ENSNVIP00000003538	ENSNVIP00000013865	ENSNVIP00000003538	annotation not available	annotation not available	0.923
ENSNVIP00000013865	PARK7	ENSNVIP00000013865	ENSNVIP00000007637	annotation not available	Parkinsonism associated deglycase.	0.881
ENSNVIP00000013865	SNCA	ENSNVIP00000013865	ENSNVIP00000000095	annotation not available	Synuclein alpha.	0.983
ENSNVIP00000013865	TP53	ENSNVIP00000013865	ENSNVIP00000005141	annotation not available	Tumor protein p53.	0.503
MAP3K5	DAXX	ENSNVIP00000024630	ENSNVIP00000016455	Mitogen-activated protein kinase kinase kinase 5.	Death domain associated protein.	0.996
MAP3K5	PARK7	ENSNVIP00000024630	ENSNVIP00000007637	Mitogen-activated protein kinase kinase kinase 5.	Parkinsonism associated deglycase.	0.900
NFE2L2	PARK7	ENSNVIP00000008837	ENSNVIP00000007637	Nuclear factor, erythroid 2 like 2.	Parkinsonism associated deglycase.	0.792
NFE2L2	SOD1	ENSNVIP00000008837	ENSNVIP00000006040	Nuclear factor, erythroid 2 like 2.	Superoxide dismutase 1.	0.552
NFE2L2	SOD3	ENSNVIP00000008837	ENSNVIP00000016683	Nuclear factor, erythroid 2 like 2.	Superoxide dismutase 3.	0.403
NFE2L2	TP53	ENSNVIP00000008837	ENSNVIP00000005141	Nuclear factor, erythroid 2 like 2.	Tumor protein p53.	0.577
PARK7	DAXX	ENSNVIP00000007637	ENSNVIP00000016455	Parkinsonism associated deglycase.	Death domain associated protein.	0.796
PARK7	ENSNVIP00000003538	ENSNVIP00000007637	ENSNVIP00000003538	Parkinsonism associated deglycase.	annotation not available	0.881
PARK7	ENSNVIP00000013865	ENSNVIP00000007637	ENSNVIP00000013865	Parkinsonism associated deglycase.	annotation not available	0.881