STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBR3Ubiquitin protein ligase E3 component n-recognin 3. (1890 aa)    
Predicted Functional Partners:
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
   
  
 0.843
ENSNVIP00000031731
Cullin 5.
   
    0.798
ARHGAP4
Rho GTPase activating protein 4.
      
 0.625
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 
 0.593
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 
 0.593
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.582
ENSNVIP00000009977
annotation not available
      
 0.550
MIPEP
Mitochondrial intermediate peptidase.
      
 0.542
UBR5
Ubiquitin protein ligase E3 component n-recognin 5.
   
  
 0.503
CDH23
Cadherin related 23.
    
 
 0.497
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.