STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBR3Ubiquitin protein ligase E3 component n-recognin 3. (1890 aa)    
Predicted Functional Partners:
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
   
  
 0.856
ENSNVIP00000031731
Cullin 5.
   
    0.843
ARHGAP4
Rho GTPase activating protein 4.
      
 0.753
ATMIN
ATM interactor.
      
 0.690
ENSNVIP00000009977
annotation not available
   
  
 0.656
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.598
ENSNVIP00000008278
annotation not available
      
 0.574
UBR5
Ubiquitin protein ligase E3 component n-recognin 5.
   
  
 0.552
CDH23
Cadherin related 23.
    
 
 0.543
UBAC1
UBA domain containing 1.
      
 0.537
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.